Title: Full ingestion pipeline recipe  
Owner: Lukasz Roguski
Creator: Lukasz Roguski Apr 04, 2019
Last Changed by: Tom Searle Mar 24, 2023
Tiny Link: (useful for email) https://cogstack.atlassian.net/wiki/x/DgAuIg
Export As: Word · PDF  
Labels
Global Labels (3)
Page Permissions
Page restrictions:
  • Only Amos Folarin can edit this page. (set by Lukasz Roguski at Apr 08, 2019 13:31)
  • Only Lukasz Roguski can edit this page. (set by Lukasz Roguski at Apr 04, 2019 14:04)
Time Editor  
Mar 24, 2023 15:02 Tom Searle View Changes
Apr 09, 2019 16:07 Lukasz Roguski View Changes
Apr 09, 2019 15:36 Lukasz Roguski View Changes
Apr 09, 2019 15:26 Lukasz Roguski View Changes
Apr 09, 2019 14:34 Lukasz Roguski  
Outgoing Links
External Links (43)
    https://github.com/ropensci/elastic
    https://www.postgresql.org/
    https://www.elastic.co/guide/en/elasticsearch/reference/cur…
    https://gate.ac.uk/
    https://www.elastic.co/guide/en/elasticsearch/reference/cur…
    https://cogstack.atlassian.net/wiki/spaces/COGDOC/pages/379…
    https://docs.docker.com/compose/
    https://github.com/synthetichealth/synthea/wiki/CSV-File-Da…
    https://www.docker.com/
    https://gate.ac.uk/documentation.html
    https://gate.ac.uk/family/developer.html
    https://github.com/GateNLP/Bio-YODIE
    https://gate.ac.uk/sale/tao/splitch13.html
    https://www.elastic.co/guide/en/elasticsearch/reference/cur…
    https://www.elastic.co/guide/en/elasticsearch/reference/cur…
    https://github.com/CogStack/nlp-rest-service
    https://github.com/CogStack/CogStack-SemEHR/
    localhost:9200/
    https://www.elastic.co/guide/en/kibana/current/tutorial-def…
    https://www.elastic.co/guide/en/kibana/current/dashboard.ht…
    https://www.elastic.co/guide/en/kibana/current/timelion.htm…
    https://cogstack.atlassian.net/wiki/spaces/COGDOC/pages/166…
    https://cogstack.atlassian.net/wiki/spaces/COGDOC/pages/170…
    https://gate.ac.uk/family/embedded.html
    https://www.elastic.co/products/kibana
    https://www.mtsamples.com/
    https://www.elastic.co/guide/
    https://www.elastic.co/products/stack
    https://spring.io/
    https://github.com/CogStack/CogStack-Recipes
    https://www.fda.gov/drugs/informationondrugs/ucm079750.htm
    https://github.com/CogStack/nlp-rest-service/tree/master/se…
    https://synthetichealth.github.io/synthea/
    https://hub.docker.com/?namespace=cogstacksystems
    https://lucene.apache.org/core/2_9_4/queryparsersyntax.html
    https://www.elastic.co/guide/en/kibana/current/introduction…
    https://github.com/CogStack/annotations-ingester
    https://yaml.org/
    https://www.elastic.co/guide/en/kibana/current/discover.htm…
    https://github.com/CogStack/CogStack-Pipeline
    https://cran.r-project.org/web/packages/elasticsearchr/vign…
    localhost:5601/
    https://www.pgadmin.org/